WormBase Tree Display for Variation: WBVar00045453
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WBVar00045453 | Name | Public_name | WBVar00045453 | ||
---|---|---|---|---|---|
Other_name | haw40213 | ||||
cewivar00148723 | |||||
Y48G9A.4b.1:c.1969-683A>T | |||||
Y48G9A.4a.1:c.1714-683A>T | |||||
HGVSg | CHROMOSOME_III:g.2144939A>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y48G9A | |
Flanking_sequences | aatttttcacaatttttttaactta | gaaatttgaaatttcggtcgaaatt | |||
Mapping_target | Y48G9A | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00021698 | |||
Transcript | Y48G9A.4b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y48G9A.4b.1:c.1969-683A>T | ||||
Intron_number | 10/15 | ||||
Y48G9A.4a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y48G9A.4a.1:c.1714-683A>T | ||||
Intron_number | 7/12 | ||||
Remark | [20081124 db] this Variation was previously named hw40213 | ||||
Method | WGS_Hawaiian_Waterston |