WormBase Tree Display for Variation: WBVar00046030
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| WBVar00046030 | Name | Public_name | WBVar00046030 | ||
|---|---|---|---|---|---|
| Other_name | haw90304 | ||||
| haw175254 | |||||
| cewivar00255810 | |||||
| T19C9.5.1:c.225A>G | |||||
| CE16422:p.Glu75= | |||||
| HGVSg | CHROMOSOME_V:g.17227446A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | T19C9 | |
| Flanking_sequences | atgagtcattggttgcggaagccga | aatgaaaagtactactgtgaacctg | |||
| Mapping_target | T19C9 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006642 | From_analysis | WGS_De_Bono | |||
| WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00595119 | |||
| WBVar01276524 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00011841 | |||
| Transcript | T19C9.5.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | T19C9.5.1:c.225A>G | ||||
| HGVSp | CE16422:p.Glu75= | ||||
| cDNA_position | 1715 | ||||
| CDS_position | 225 | ||||
| Protein_position | 75 | ||||
| Exon_number | 3/6 | ||||
| Codon_change | gaA/gaG | ||||
| Amino_acid_change | E | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw90304 | ||||
| Method | WGS_Hawaiian_Waterston |
