WormBase Tree Display for Variation: WBVar00046103
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WBVar00046103 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00046103 | |||
Other_name | pkP3055 | ||||
haw40343 | |||||
cewivar00194879 | |||||
C39B5.14.1:c.840-174G>T | |||||
C39B5.14.2:c.840-174G>T | |||||
HGVSg | CHROMOSOME_III:g.2216771G>T | ||||
Sequence_details | SMap | S_parent | Sequence | C39B5 | |
Flanking_sequences | ggtgggacccaaatttttaaaatgc | cggaacctaggcaatatggggggtc | |||
Mapping_target | C39B5 | ||||
Type_of_mutation | Substitution | G | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
SNP_Wicks | |||||
History | Acquires_merge | WBVar00240536 | |||
Status | Live | ||||
Affects | Gene | WBGene00189950 | |||
Transcript | C39B5.14.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C39B5.14.1:c.840-174G>T | ||||
Intron_number | 7/8 | ||||
C39B5.14.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C39B5.14.2:c.840-174G>T | ||||
Intron_number | 7/8 | ||||
Reference | WBPaper00004703 | ||||
Remark | [20081124 db] this Variation was previously named hw40343 | ||||
Method | WGS_Hawaiian_Waterston |