WormBase Tree Display for Variation: WBVar00046526
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| WBVar00046526 | Name | Public_name | WBVar00046526 | ||
|---|---|---|---|---|---|
| Other_name | pas20902 | ||||
| cewivar00106201 | |||||
| T27D1.1.1:c.89-24T>G | |||||
| HGVSg | CHROMOSOME_III:g.3699518A>C | ||||
| Sequence_details | SMap | S_parent | Sequence | CHROMOSOME_III | |
| Flanking_sequences | aacaaatagggccttgagtgctttaatttgaacttttcatcgtcaaagtatcgtccgtagatcgagaatcctcctctaccatctccttctgtgatgtctcctccctaaatcgtcaatttttcaaaaatttcagctaaaaaccgccggacctggatcataaacttctttacaattctatgaaattcgttttgtttgtaatgaagccgtgctttattatttggagtcattccgacttctcctgtgcacaatgctcgaaagttttcacatgttttaggtgctgaaaaataattgatttttttt | aattaattttctgggcagatttctaaccatcttcgacaaaaagtcgtatttcaattcttccaatcagattctcatcgactgaaatatctaggaacactcttttttcagcggccattcgcagcctgaaaatggttttggtttcgattcgaaattttaaattccgaaataaagaaatataatttcacagaagcctcaacgaaacaaaaaacattctccgggattcaatttttagggttttatatatataatatatacggatggaaacaaaaaaaaacgagtaatcacaattcaacgccgtga | |||
| Mapping_target | CHROMOSOME_III | ||||
| Type_of_mutation | Substitution | A | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00000885 | |||
| Transcript | T27D1.1.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | T27D1.1.1:c.89-24T>G | ||||
| Intron_number | 2/7 | ||||
| Method | WGS_Pasadena_Quinlan |
