WormBase Tree Display for Variation: WBVar00047038
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WBVar00047038 | Name | Public_name | WBVar00047038 | ||
---|---|---|---|---|---|
Other_name | haw40530 | ||||
H04J21.3b.1:c.424+429C>T | |||||
H04J21.3a.1:c.424+429C>T | |||||
HGVSg | CHROMOSOME_III:g.2349465C>T | ||||
Sequence_details | SMap | S_parent | Sequence | H04J21 | |
Flanking_sequences | aagcaacaattattgcgtttttttt | attaatttttttttaatttttgaggcttttttttggcgaagagtcgctttttaatcgaattttgaatataaaaactgaattctatgtggtttttggatttaaaatcattcggtggccgaactctttggatttctaggccacaaaatttttgaactattttcccctgtgacttatgtgcctctactcgtttttttttgtttgcactaaaaactgtatttattcacattttcatcctcaaattgggctgaaaatgtgaataaataccgtatttctgccaacaatttgacaatagagcacatttgtcactcggagatgcggaagctatgcccaaattttcatt | |||
Mapping_target | H04J21 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Status | Live | ||||
Affects | Gene | WBGene00001589 | |||
Transcript | H04J21.3b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | H04J21.3b.1:c.424+429C>T | ||||
Intron_number | 4/14 | ||||
H04J21.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | H04J21.3a.1:c.424+429C>T | ||||
Intron_number | 4/15 | ||||
Remark | [20081124 db] this Variation was previously named hw40530 | ||||
Method | WGS_Hawaiian_Waterston |