WormBase Tree Display for Variation: WBVar00047645
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WBVar00047645 | Name | Public_name | WBVar00047645 | ||
---|---|---|---|---|---|
Other_name | haw90627 | ||||
cewivar00257019 | |||||
CE45116:p.Leu862= | |||||
Y20C6A.1a.1:c.2439G>C | |||||
CE37058:p.Leu813= | |||||
Y20C6A.1b.1:c.2586G>C | |||||
HGVSg | CHROMOSOME_V:g.17372169C>G | ||||
Sequence_details | SMap | S_parent | Sequence | Y20C6A | |
Flanking_sequences | tcagctcatttttatccaaataaga | aggatccttcttatgatcggtagat | |||
Mapping_target | Y20C6A | ||||
Type_of_mutation | Substitution | C | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00012491 | |||
Transcript | Y20C6A.1a.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | Y20C6A.1a.1:c.2439G>C | ||||
HGVSp | CE37058:p.Leu813= | ||||
cDNA_position | 2481 | ||||
CDS_position | 2439 | ||||
Protein_position | 813 | ||||
Exon_number | 9/11 | ||||
Codon_change | ctG/ctC | ||||
Amino_acid_change | L | ||||
Y20C6A.1b.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | Y20C6A.1b.1:c.2586G>C | ||||
HGVSp | CE45116:p.Leu862= | ||||
cDNA_position | 2586 | ||||
CDS_position | 2586 | ||||
Protein_position | 862 | ||||
Exon_number | 8/9 | ||||
Codon_change | ctG/ctC | ||||
Amino_acid_change | L | ||||
Remark | [20081124 db] this Variation was previously named hw90627 | ||||
Method | WGS_Hawaiian_Waterston |