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WormBase Tree Display for Variation: WBVar00047705

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Name Class

WBVar00047705EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00047705
Other_namehaw90639
haw175485
cewivar00257030
CE45116:p.Asp219=
Y20C6A.1a.1:c.657T>C
Y20C6A.1b.1:c.657T>C
CE37058:p.Asp219=
HGVSgCHROMOSOME_V:g.17375846A>G
Sequence_detailsSMapS_parentSequenceY20C6A
Flanking_sequencestaacttttgcaaaatgaaaaaaggctcaaatttcaagtcagtggaaaggt
Mapping_targetY20C6A
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00595350
StatusLive
AffectsGeneWBGene00012491
TranscriptY20C6A.1a.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY20C6A.1a.1:c.657T>C
HGVSpCE37058:p.Asp219=
cDNA_position699
CDS_position657
Protein_position219
Exon_number3/11
Codon_changegaT/gaC
Amino_acid_changeD
Y20C6A.1b.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY20C6A.1b.1:c.657T>C
HGVSpCE45116:p.Asp219=
cDNA_position657
CDS_position657
Protein_position219
Exon_number2/9
Codon_changegaT/gaC
Amino_acid_changeD
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw90639
MethodWGS_Hawaiian_Waterston