WormBase Tree Display for Variation: WBVar00048583

WBVar00048583 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00048583
    Other_name: haw40839
      cewivar00195208
      Y54F10AL.2c.1:c.3462+127T>C
      Y54F10AL.2a.1:c.3528+127T>C
    HGVSg: CHROMOSOME_III:g.2485801T>C
  Sequence_details: SMap: S_parent: Sequence: Y54F10AL
    Flanking_sequences: atattcgaattcagcgcactgagag tttcaaatgacacccatattgactatattc
    Mapping_target: Y54F10AL
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
      WBStrain00006640 From_analysis: Million_mutation_project_reanalysis
      WBStrain00008273 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022850 From_analysis: WGS_De_Bono
          Million_mutation_project_reanalysis
      WBStrain00022930 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023138 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023139 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027648 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027660 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01327934
    Status: Live
  Affects: Gene: WBGene00004884
    Transcript: Y54F10AL.2c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54F10AL.2c.1:c.3462+127T>C
        Intron_number: 17/18
      Y54F10AL.2a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54F10AL.2a.1:c.3528+127T>C
        Intron_number: 18/19
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw40839
  Method: WGS_Hawaiian_Waterston