WormBase Tree Display for Variation: WBVar00049818
expand all nodes | collapse all nodes | view schema
| WBVar00049818 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00049818 | |||
| Other_name | pas2490 | ||||
| haw41086 | |||||
| haw141912 | |||||
| cewivar00103814 | |||||
| Y71H2B.11.3:c.203A>C | |||||
| Y71H2B.11.1:c.203A>C | |||||
| Y71H2B.11.2:c.203A>C | |||||
| CE34427:p.Tyr68Ser | |||||
| HGVSg | CHROMOSOME_III:g.2605432A>C | ||||
| Sequence_details | SMap | S_parent | Sequence | Y71H2B | |
| Flanking_sequences | atttacaattttttattctacatgt | tagcgaaaaacaaaaatcattggaa | |||
| Mapping_target | Y71H2B | ||||
| Type_of_mutation | Substitution | A | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (18) | |||||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson6900 | |||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Pasadena_Quinlan | |||||
| History | Acquires_merge | WBVar00097631 | |||
| WBVar00561777 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00022198 | |||
| Transcript | Y71H2B.11.1 | VEP_consequence | missense_variant | ||
| VEP_impact | MODERATE | ||||
| HGVSc | Y71H2B.11.1:c.203A>C | ||||
| HGVSp | CE34427:p.Tyr68Ser | ||||
| cDNA_position | 419 | ||||
| CDS_position | 203 | ||||
| Protein_position | 68 | ||||
| Exon_number | 3/6 | ||||
| Codon_change | tAt/tCt | ||||
| Amino_acid_change | Y/S | ||||
| Y71H2B.11.3 | VEP_consequence | missense_variant | |||
| VEP_impact | MODERATE | ||||
| HGVSc | Y71H2B.11.3:c.203A>C | ||||
| HGVSp | CE34427:p.Tyr68Ser | ||||
| cDNA_position | 430 | ||||
| CDS_position | 203 | ||||
| Protein_position | 68 | ||||
| Exon_number | 3/6 | ||||
| Codon_change | tAt/tCt | ||||
| Amino_acid_change | Y/S | ||||
| Y71H2B.11.2 | VEP_consequence | missense_variant | |||
| VEP_impact | MODERATE | ||||
| HGVSc | Y71H2B.11.2:c.203A>C | ||||
| HGVSp | CE34427:p.Tyr68Ser | ||||
| cDNA_position | 506 | ||||
| CDS_position | 203 | ||||
| Protein_position | 68 | ||||
| Exon_number | 4/7 | ||||
| Codon_change | tAt/tCt | ||||
| Amino_acid_change | Y/S | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw41086 | ||||
| Method | WGS_Hawaiian_Waterston |
