WormBase Tree Display for Variation: WBVar00050100
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| WBVar00050100 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00050100 | |||
| Other_name | haw91118 | ||||
| haw175846 | |||||
| cewivar00258182 | |||||
| CE40854:p.Tyr221= | |||||
| F57G4.8.1:c.663C>T | |||||
| HGVSg | CHROMOSOME_V:g.17649448G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | F57G4 | |
| Flanking_sequences | ggacaacaaactggttcactttaat | tatttcacttttttcagcaatttct | |||
| Mapping_target | F57G4 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00595711 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00010212 | |||
| Transcript | F57G4.8.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F57G4.8.1:c.663C>T | ||||
| HGVSp | CE40854:p.Tyr221= | ||||
| cDNA_position | 668 | ||||
| CDS_position | 663 | ||||
| Protein_position | 221 | ||||
| Exon_number | 4/6 | ||||
| Codon_change | taC/taT | ||||
| Amino_acid_change | Y | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw91118 | ||||
| Method | WGS_Hawaiian_Waterston |
