WormBase Tree Display for Variation: WBVar00050473

WBVar00050473 Evidence: Paper_evidence: WBPaper00038208
  Name: Public_name: WBVar00050473
    Other_name: haw41217
      haw141996
      Y71H2AM.5.2:c.-5+2077A>T
      Y71H2AM.8.1:c.204-330A>T
    HGVSg: CHROMOSOME_III:g.2701761A>T
  Sequence_details: SMap: S_parent: Sequence: Y71H2AM
    Flanking_sequences: atttttttaaccttaaaaattcttt aaaaaatcctaaaaattgcacaaat
    Mapping_target: Y71H2AM
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_Hawaiian_Waterston
          WGS_Yanai
    Laboratory: RW
    Person: WBPerson1562
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_Yanai
    History: Acquires_merge: WBVar00561861
    Status: Live
  Affects: Gene: WBGene00022173
      WBGene00022170
    Transcript: Y71H2AM.5.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y71H2AM.5.2:c.-5+2077A>T
        Intron_number: 1/5
      Y71H2AM.8.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y71H2AM.8.1:c.204-330A>T
        Intron_number: 3/7
  Reference: WBPaper00038208
  Remark: [20081124 db] this Variation was previously named hw41217
  Method: WGS_Hawaiian_Waterston