Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar00051568

expand all nodes | collapse all nodes | view schema

Name Class

WBVar00051568EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00051568
Other_namehaw41436
haw142147
Y71H2AM.20b.3:c.-195+406A>T
Y71H2AM.20a.1:c.637+406A>T
Y71H2AM.5.2:c.-4-1459T>A
Y71H2AM.20b.1:c.-195+406A>T
Y71H2AM.20b.2:c.-195+406A>T
HGVSgCHROMOSOME_III:g.2784741T>A
Sequence_detailsSMapS_parentSequenceY71H2AM
Flanking_sequencesttcaatgaaaaattgtgaaaacttagatttttaaaggaaaattgccaaaa
Mapping_targetY71H2AM
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
HistoryAcquires_mergeWBVar00562012
StatusLive
AffectsGeneWBGene00022185
WBGene00022170
TranscriptY71H2AM.5.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71H2AM.5.2:c.-4-1459T>A
Intron_number1/5
Y71H2AM.20b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71H2AM.20b.2:c.-195+406A>T
Intron_number3/6
Y71H2AM.20b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71H2AM.20b.1:c.-195+406A>T
Intron_number4/7
Y71H2AM.20a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71H2AM.20a.1:c.637+406A>T
Intron_number5/7
Y71H2AM.20b.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71H2AM.20b.3:c.-195+406A>T
Intron_number2/5
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw41436
MethodWGS_Hawaiian_Waterston