WormBase Tree Display for Variation: WBVar00051948

WBVar00051948 Name: Public_name: WBVar00051948
    Other_name: snp_Y71H2AM[11]
      haw41512
      cewivar00149586
      Y71H2AM.2a.3:c.633+121G>T
      Y71H2AM.2a.2:c.633+121G>T
      Y71H2AM.2a.1:c.633+121G>T
      Y71H2AM.2b.1:c.633+121G>T
    HGVSg: CHROMOSOME_III:g.2823830G>T
  Sequence_details: SMap: S_parent: Sequence: Y71H2AM
    Flanking_sequences: aaatataatttttcaaaaaaaaaat ttgtgctcaaaattgtggaattttc
    Mapping_target: Y71H2AM
    Type_of_mutation: Substitution: G T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (28)
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
      SNP_Wicks
    History: Acquires_merge: WBVar00248022
        WBVar01260551
        WBVar01329035
    Status: Live
  Affects: Gene: WBGene00022167
    Transcript: Y71H2AM.2b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y71H2AM.2b.1:c.633+121G>T
        Intron_number: 4/6
      Y71H2AM.2a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y71H2AM.2a.1:c.633+121G>T
        Intron_number: 4/6
      Y71H2AM.2a.3 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y71H2AM.2a.3:c.633+121G>T
        Intron_number: 4/5
      Y71H2AM.2a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y71H2AM.2a.2:c.633+121G>T
        Intron_number: 4/6
  Reference: WBPaper00004703
    WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw41512
  Method: WGS_Hawaiian_Waterston