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WormBase Tree Display for Variation: WBVar00051953

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Name Class

WBVar00051953NamePublic_nameWBVar00051953
Other_namesnp_Y71H2AM[13]
haw41513
haw142189
cewivar00195571
Y71H2AM.2b.1:c.633+237C>T
Y71H2AM.2a.3:c.633+237C>T
Y71H2AM.2a.2:c.633+237C>T
Y71H2AM.2a.1:c.633+237C>T
HGVSgCHROMOSOME_III:g.2823946C>T
Sequence_detailsSMapS_parentSequenceY71H2AM
Flanking_sequencesaatcggtaaaaactctgaaaaatttaatttcaatagatttttgcagtaaa
Mapping_targetY71H2AM
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00023138From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
SNP_Wicks
HistoryAcquires_mergeWBVar00562054
WBVar00248024
StatusLive
AffectsGeneWBGene00022167
TranscriptY71H2AM.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71H2AM.2b.1:c.633+237C>T
Intron_number4/6
Y71H2AM.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71H2AM.2a.1:c.633+237C>T
Intron_number4/6
Y71H2AM.2a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71H2AM.2a.3:c.633+237C>T
Intron_number4/5
Y71H2AM.2a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71H2AM.2a.2:c.633+237C>T
Intron_number4/6
ReferenceWBPaper00038208
WBPaper00004703
Remark[20081124 db] this Variation was previously named hw41513
MethodWGS_Hawaiian_Waterston