WormBase Tree Display for Variation: WBVar00051953
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WBVar00051953 | Name | Public_name | WBVar00051953 | ||
---|---|---|---|---|---|
Other_name | snp_Y71H2AM[13] | ||||
haw41513 | |||||
haw142189 | |||||
cewivar00195571 | |||||
Y71H2AM.2b.1:c.633+237C>T | |||||
Y71H2AM.2a.3:c.633+237C>T | |||||
Y71H2AM.2a.2:c.633+237C>T | |||||
Y71H2AM.2a.1:c.633+237C>T | |||||
HGVSg | CHROMOSOME_III:g.2823946C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y71H2AM | |
Flanking_sequences | aatcggtaaaaactctgaaaaattt | aatttcaatagatttttgcagtaaa | |||
Mapping_target | Y71H2AM | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
SNP_Wicks | |||||
History | Acquires_merge | WBVar00562054 | |||
WBVar00248024 | |||||
Status | Live | ||||
Affects | Gene | WBGene00022167 | |||
Transcript | Y71H2AM.2b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y71H2AM.2b.1:c.633+237C>T | ||||
Intron_number | 4/6 | ||||
Y71H2AM.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y71H2AM.2a.1:c.633+237C>T | ||||
Intron_number | 4/6 | ||||
Y71H2AM.2a.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y71H2AM.2a.3:c.633+237C>T | ||||
Intron_number | 4/5 | ||||
Y71H2AM.2a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y71H2AM.2a.2:c.633+237C>T | ||||
Intron_number | 4/6 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00004703 | |||||
Remark | [20081124 db] this Variation was previously named hw41513 | ||||
Method | WGS_Hawaiian_Waterston |