WormBase Tree Display for Variation: WBVar00053043

WBVar00053043 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00053043
    Other_name: haw41731
      cewivar00195747
      Y55D5A.5c.1:c.-99+4449A>C
      Y55D5A.11:n.1211A>C
    HGVSg: CHROMOSOME_III:g.3036333T>G
  Sequence_details: SMap: S_parent: Sequence: Y55D5A
    Flanking_sequences: cgacgacgaaataagttgatgggta tctgaatcgaatgatgatgatgacg
    Mapping_target: Y55D5A
    Type_of_mutation: Substitution: T G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (25)
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01329530
        WBVar01261024
    Status: Live
  Affects: Gene: WBGene00000898
      WBGene00219761
    Transcript: Y55D5A.5c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y55D5A.5c.1:c.-99+4449A>C
        Intron_number: 1/20
      Y55D5A.11 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        HGVSc: Y55D5A.11:n.1211A>C
        cDNA_position: 1211
        Exon_number: 1/1
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw41731
  Method: WGS_Hawaiian_Waterston