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WormBase Tree Display for Variation: WBVar00053258

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Name Class

WBVar00053258EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar00053258
Other_namehaw41774
cewivar00195784
H06I04.6b.1:c.717+138A>G
H06I04.6b.3:c.717+138A>G
H06I04.6b.2:c.717+138A>G
H06I04.6a.2:c.201+138A>G
H06I04.6a.1:c.201+138A>G
H06I04.6a.3:c.201+138A>G
HGVSgCHROMOSOME_III:g.3062206T>C
Sequence_detailsSMapS_parentSequenceH06I04
Flanking_sequencesacctaggccaccaacttcatttaggataactttggttacaattaatattt
Mapping_targetH06I04
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (47)
LaboratoryRW
QX
PersonWBPerson1562
WBPerson1730
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WGS_Andersen
HistoryAcquires_mergeWBVar01444746
StatusLive
AffectsGeneWBGene00019170
TranscriptH06I04.6b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScH06I04.6b.2:c.717+138A>G
Intron_number5/6
H06I04.6b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScH06I04.6b.1:c.717+138A>G
Intron_number5/7
H06I04.6a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScH06I04.6a.3:c.201+138A>G
Intron_number4/6
H06I04.6b.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScH06I04.6b.3:c.717+138A>G
Intron_number5/7
H06I04.6a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScH06I04.6a.1:c.201+138A>G
Intron_number5/7
H06I04.6a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScH06I04.6a.2:c.201+138A>G
Intron_number3/5
ReferenceWBPaper00040707
Remark[20081124 db] this Variation was previously named hw41774
MethodWGS_Hawaiian_Waterston