WormBase Tree Display for Variation: WBVar00053515
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WBVar00053515 | Name | Public_name | WBVar00053515 | ||
---|---|---|---|---|---|
Other_name | haw91801 | ||||
cewivar00259469 | |||||
CE41501:p.Leu171= | |||||
CE47488:p.Leu21= | |||||
C06H5.6a.1:c.513T>G | |||||
C06H5.6b.1:c.63T>G | |||||
C06H5.6a.2:c.513T>G | |||||
HGVSg | CHROMOSOME_V:g.17885145A>C | ||||
Sequence_details | SMap | S_parent | Sequence | C06H5 | |
Flanking_sequences | cagccacactaatgtacaggggaat | aggaataacgggcggcgacccagaa | |||
Mapping_target | C06H5 | ||||
Type_of_mutation | Substitution | A | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00007394 | |||
Transcript | C06H5.6a.2 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | C06H5.6a.2:c.513T>G | ||||
HGVSp | CE41501:p.Leu171= | ||||
cDNA_position | 518 | ||||
CDS_position | 513 | ||||
Protein_position | 171 | ||||
Exon_number | 6/12 | ||||
Codon_change | ctT/ctG | ||||
Amino_acid_change | L | ||||
C06H5.6b.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | C06H5.6b.1:c.63T>G | ||||
HGVSp | CE47488:p.Leu21= | ||||
cDNA_position | 63 | ||||
CDS_position | 63 | ||||
Protein_position | 21 | ||||
Exon_number | 1/6 | ||||
Codon_change | ctT/ctG | ||||
Amino_acid_change | L | ||||
C06H5.6a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | C06H5.6a.1:c.513T>G | ||||
HGVSp | CE41501:p.Leu171= | ||||
cDNA_position | 534 | ||||
CDS_position | 513 | ||||
Protein_position | 171 | ||||
Exon_number | 6/12 | ||||
Codon_change | ctT/ctG | ||||
Amino_acid_change | L | ||||
Remark | [20081124 db] this Variation was previously named hw91801 | ||||
Method | WGS_Hawaiian_Waterston |