WormBase Tree Display for Variation: WBVar00053531
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| WBVar00053531 | Name | Public_name | WBVar00053531 | ||
|---|---|---|---|---|---|
| Other_name | pas22303 | ||||
| haw105540 | |||||
| cewivar00059285 | |||||
| F13B9.5.1:c.446-393A>T | |||||
| HGVSg | CHROMOSOME_X:g.8278106A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | F13B9 | |
| Flanking_sequences | aatcactgtcaaatgttcaaaccccatacattttaaaatttgaatattttgaatgtaattgaaataaaaaatggaaaattttatgatggaggacttccgcaaaaactggtgaccatttagtattgagctttttgattttaaataaaaaaaactttccaaagtttttggaataattttattatggtatatttgattatttttgtaccataggaatggttttgaaaaacttcccccgcagatcggagtccgccttcaaacgtcgttttcggtttatttgttaattttagaattaatacttta | gcagcctgagaattaaaaaatcaaccttattcttttattcaaattaaaatttttaaaatgtagtgtaatgatacacattgaaccagcaaatttgacatagaaataccgcacatctttcaaatgttctctatggttcatctacttcgaaaaaatgttgtgaaaataatttgttcttagaatgaaaccttttcacaaaatgtttatggaattgttttattttatttaaaacatgtacaattaatacaattgatgtaattttgtcaggaaaagtgaattagatcatgtgatgtttaatcattc | |||
| Mapping_target | F13B9 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (35) | |||||
| Laboratory | RW | ||||
| Person | WBPerson6900 | ||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar00081180 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00002239 | |||
| Transcript | F13B9.5.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F13B9.5.1:c.446-393A>T | ||||
| Intron_number | 5/15 | ||||
| Method | WGS_Pasadena_Quinlan |
