WormBase Tree Display for Variation: WBVar00053633
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WBVar00053633 | Name | Public_name | WBVar00053633 | ||
---|---|---|---|---|---|
Other_name | pas3774 | ||||
haw41849 | |||||
H06I04.3a.1:c.2148-796C>T | |||||
H06I04.3c.1:c.2148-796C>T | |||||
HGVSg | CHROMOSOME_III:g.3082698C>T | ||||
Sequence_details | SMap | S_parent | Sequence | H06I04 | |
Flanking_sequences | ggacaatattgcacgattttaggct | aaaaattgaaaaaaaaaacgagaaa | |||
Mapping_target | H06I04 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson6900 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Pasadena_Quinlan | |||||
History | Acquires_merge | WBVar00098915 | |||
Status | Live | ||||
Affects | Gene | WBGene00019168 | |||
Transcript | H06I04.3a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | H06I04.3a.1:c.2148-796C>T | ||||
Intron_number | 9/11 | ||||
H06I04.3c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | H06I04.3c.1:c.2148-796C>T | ||||
Intron_number | 8/9 | ||||
Remark | [20081124 db] this Variation was previously named hw41849 | ||||
Method | WGS_Hawaiian_Waterston |