WormBase Tree Display for Variation: WBVar00054231
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WBVar00054231 | Name | Public_name | WBVar00054231 | ||
---|---|---|---|---|---|
Other_name | pas22443 | ||||
cewivar00059497 | |||||
CE30956:p.Lys627= | |||||
F16F9.2.1:c.1881G>A | |||||
HGVSg | CHROMOSOME_X:g.8453184C>T | ||||
Sequence_details | SMap | S_parent | Sequence | F16F9 | |
Flanking_sequences | ttcagttacgatttcttttgtagacgtgatctcaggtgtggtagaggtggttgatgttgtttcctcgtcagttgtaataatgccggttgaagcttcagcgaaaatagctgtagtggttggctcttctgtagtcgttgaaccttcagtagtgattttcaattccgtggtggtcgtctcttcagaagtagttgacaactccggggttgttgccttgccggttgtggatgactctgtcgtggtggttggctcatcagtagtggttggctcctctgtggtggatgcctttttggtagtggatgt | ttttccgtggaaactgactcctgtgtggttgttggcttctgagtagcggttgacttttccgcagttgttggttcctctgtggtaactgtctgctcagtcgtgaatggtagtgccgtggtagttgactcggcagtactggttggctgttctgtggttgttgggttttcagttgtgggcggatttccagtgttagctggctcctctgtggtagttacttcttcagttgtggatgattcttcagtagtagttggttcctctgtagtaattgccttctcagtcttgtgttgtccggtcgtggtg | |||
Mapping_target | F16F9 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (21) | |||||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00001068 | |||
Transcript | F16F9.2.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | F16F9.2.1:c.1881G>A | ||||
HGVSp | CE30956:p.Lys627= | ||||
cDNA_position | 1881 | ||||
CDS_position | 1881 | ||||
Protein_position | 627 | ||||
Exon_number | 5/9 | ||||
Codon_change | aaG/aaA | ||||
Amino_acid_change | K | ||||
Method | WGS_Pasadena_Quinlan |