WormBase Tree Display for Variation: WBVar00054307
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| WBVar00054307 | Evidence | Paper_evidence | WBPaper00005344 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | cs40 | |||||
| Other_name | R11E3.6a.1:c.1444C>T | ||||||
| CE19548:p.Arg482Ter | |||||||
| HGVSg | CHROMOSOME_IV:g.4796535G>A | ||||||
| Sequence_details | SMap | S_parent | Sequence | R11E3 | |||
| Flanking_sequences | tgtgctgagcactggacagagataccgtat | gatgtgaaacgtgtccgttcacttcaaatg | |||||
| Mapping_target | R11E3 | ||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00005344 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Laboratory | UP | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00001324 | |||||
| Transcript | R11E3.6a.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | R11E3.6a.1:c.1444C>T | ||||||
| HGVSp | CE19548:p.Arg482Ter | ||||||
| cDNA_position | 1446 | ||||||
| CDS_position | 1444 | ||||||
| Protein_position | 482 | ||||||
| Exon_number | 10/17 | ||||||
| Codon_change | Cga/Tga | ||||||
| Amino_acid_change | R/* | ||||||
| Genetics | Interpolated_map_position | IV | 1.25505 | ||||
| Reference | WBPaper00005344 | ||||||
| Method | Substitution_allele |
