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WormBase Tree Display for Variation: WBVar00054388

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Name Class

WBVar00054388EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00054388
Other_namehaw42000
haw142528
cewivar00195923
R148.5a.1:c.150-53T>A
R148.5b.1:c.150-53T>A
R148.5a.2:c.150-53T>A
HGVSgCHROMOSOME_III:g.3166884T>A
Sequence_detailsSMapS_parentSequenceR148
Flanking_sequencesatgatggggcttaattaaaagctattttaagctgaattcaaaaatgttat
Mapping_targetR148
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (15)
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00562393
StatusLive
AffectsGeneWBGene00020104
TranscriptR148.5b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR148.5b.1:c.150-53T>A
Intron_number1/4
R148.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR148.5a.1:c.150-53T>A
Intron_number1/6
R148.5a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR148.5a.2:c.150-53T>A
Intron_number2/7
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw42000
MethodWGS_Hawaiian_Waterston