WormBase Tree Display for Variation: WBVar00056030
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WBVar00056030 | Name | Public_name | WBVar00056030 | ||
---|---|---|---|---|---|
Other_name | haw42328 | ||||
cewivar00196083 | |||||
F45H7.2d.3:c.1439+16G>A | |||||
F45H7.2d.2:c.1439+16G>A | |||||
F45H7.2b.1:c.1946+16G>A | |||||
F45H7.2a.1:c.1946+16G>A | |||||
F45H7.2d.1:c.1439+16G>A | |||||
HGVSg | CHROMOSOME_III:g.3357040G>A | ||||
Sequence_details | SMap | S_parent | Sequence | F45H7 | |
Flanking_sequences | ccactaataagtgagtacacataca | tgtggggatacatgcgcctttaaac | |||
Mapping_target | F45H7 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00001559 | |||
Transcript | F45H7.2d.3 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F45H7.2d.3:c.1439+16G>A | ||||
Intron_number | 14/23 | ||||
F45H7.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F45H7.2a.1:c.1946+16G>A | ||||
Intron_number | 18/27 | ||||
F45H7.2d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F45H7.2d.1:c.1439+16G>A | ||||
Intron_number | 17/25 | ||||
F45H7.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F45H7.2b.1:c.1946+16G>A | ||||
Intron_number | 18/25 | ||||
F45H7.2d.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F45H7.2d.2:c.1439+16G>A | ||||
Intron_number | 15/23 | ||||
Remark | [20081124 db] this Variation was previously named hw42328 | ||||
Method | WGS_Hawaiian_Waterston |