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WormBase Tree Display for Variation: WBVar00056653

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Name Class

WBVar00056653EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00056653
Other_namehaw92429
haw176696
cewivar00260578
R10E8.1a.5:c.-53-1121G>A
R10E8.1a.6:c.-53-1121G>A
R10E8.1a.4:c.-53-1121G>A
R10E8.1a.3:c.-53-1121G>A
R10E8.1a.2:c.-53-1121G>A
HGVSgCHROMOSOME_V:g.18244895C>T
Sequence_detailsSMapS_parentSequenceR10E8
Flanking_sequencestggagtacaattggttcagttaaaataaaaaaggagcgttgtgattaata
Mapping_targetR10E8
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00596561
StatusLive
AffectsGeneWBGene00011207
TranscriptR10E8.1a.6VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR10E8.1a.6:c.-53-1121G>A
Intron_number1/6
R10E8.1a.5VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR10E8.1a.5:c.-53-1121G>A
Intron_number3/8
R10E8.1a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR10E8.1a.2:c.-53-1121G>A
Intron_number2/7
R10E8.1a.4VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR10E8.1a.4:c.-53-1121G>A
Intron_number4/9
R10E8.1a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR10E8.1a.3:c.-53-1121G>A
Intron_number4/9
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw92429
MethodWGS_Hawaiian_Waterston