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WormBase Tree Display for Variation: WBVar00057311

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Name Class

WBVar00057311NamePublic_nameWBVar00057311
Other_namehaw42584
cewivar00106074
C48D5.2c.1:c.1684-251A>G
C48D5.2b.1:c.1789-251A>G
C48D5.2a.1:c.2995-251A>G
HGVSgCHROMOSOME_III:g.3611227A>G
Sequence_detailsSMapS_parentSequenceC32A3
Flanking_sequencesACTGAAAAATGAGTAAATTATTTGGCAAAACAAAAAAATGTCAAAAACGATTTTGCTGAAAAAAAATAGAATTTTCCTTTACAAAAGCGAATTTTGCTGG
Mapping_targetC32A3
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (18)
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00004213
TranscriptC48D5.2c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC48D5.2c.1:c.1684-251A>G
Intron_number10/10
C48D5.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC48D5.2b.1:c.1789-251A>G
Intron_number10/11
C48D5.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC48D5.2a.1:c.2995-251A>G
Intron_number17/18
Remark[20081124 db] this Variation was previously named hw42584
MethodWGS_Hawaiian_Waterston