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WormBase Tree Display for Variation: WBVar00057991

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Name Class

WBVar00057991EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00057991
Other_namehaw42720
cewivar00196235
F13B10.1a.1:c.-107+1920A>T
F13B10.1d.1:c.-1859+1920A>T
HGVSgCHROMOSOME_III:g.3899503T>A
Sequence_detailsSMapS_parentSequenceZK1058
Flanking_sequencesctgaagttggctagaaattgcaaaattcgccaaaaataagaaaaagtata
Mapping_targetZK1058
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WBStrain00006631From_analysisMillion_mutation_project_reanalysis
WBStrain00006640From_analysisMillion_mutation_project_reanalysis
WBStrain00006642From_analysisWGS_De_Bono
WBStrain00006643From_analysisMillion_mutation_project_reanalysis
WBStrain00006645From_analysisMillion_mutation_project_reanalysis
WBStrain00008273From_analysisMillion_mutation_project_reanalysis
WBStrain00023138From_analysisMillion_mutation_project_reanalysis
WBStrain00023192From_analysisMillion_mutation_project_reanalysis
WBStrain00027647From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01262555
StatusLive
AffectsGeneWBGene00006575
TranscriptF13B10.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF13B10.1a.1:c.-107+1920A>T
Intron_number1/13
F13B10.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF13B10.1d.1:c.-1859+1920A>T
Intron_number1/13
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw42720
MethodWGS_Hawaiian_Waterston