WormBase Tree Display for Variation: WBVar00060068
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| WBVar00060068 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00060068 | |||
| Other_name | haw93112 | ||||
| haw177145 | |||||
| cewivar00261195 | |||||
| CE32531:p.Leu878= | |||||
| CE46096:p.Leu878= | |||||
| Y51A2D.15a.1:c.2634C>T | |||||
| Y51A2D.15c.1:c.2136C>T | |||||
| Y51A2D.15b.1:c.2634C>T | |||||
| CE46015:p.Leu712= | |||||
| HGVSg | CHROMOSOME_V:g.18607463C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y51A2D | |
| Flanking_sequences | agcggagccaaaatctggatgagct | gaaaatatgcacaaaactcttctag | |||
| Mapping_target | Y51A2D | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00597010 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00013082 | |||
| Transcript | Y51A2D.15b.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | Y51A2D.15b.1:c.2634C>T | ||||
| HGVSp | CE32531:p.Leu878= | ||||
| cDNA_position | 2685 | ||||
| CDS_position | 2634 | ||||
| Protein_position | 878 | ||||
| Exon_number | 14/21 | ||||
| Codon_change | ctC/ctT | ||||
| Amino_acid_change | L | ||||
| Y51A2D.15a.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | Y51A2D.15a.1:c.2634C>T | ||||
| HGVSp | CE46096:p.Leu878= | ||||
| cDNA_position | 2685 | ||||
| CDS_position | 2634 | ||||
| Protein_position | 878 | ||||
| Exon_number | 14/22 | ||||
| Codon_change | ctC/ctT | ||||
| Amino_acid_change | L | ||||
| Y51A2D.15c.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | Y51A2D.15c.1:c.2136C>T | ||||
| HGVSp | CE46015:p.Leu712= | ||||
| cDNA_position | 2136 | ||||
| CDS_position | 2136 | ||||
| Protein_position | 712 | ||||
| Exon_number | 9/16 | ||||
| Codon_change | ctC/ctT | ||||
| Amino_acid_change | L | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw93112 | ||||
| Method | WGS_Hawaiian_Waterston |
