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WormBase Tree Display for Variation: WBVar00060103

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Name Class

WBVar00060103NamePublic_nameWBVar00060103
Other_namepas36195
haw93119
cewivar00048431
Y51A2D.15c.1:c.2571C>T
Y51A2D.15b.1:c.3069C>T
CE46096:p.Asn1023=
CE32531:p.Asn1023=
Y51A2D.15a.1:c.3069C>T
CE46015:p.Asn857=
HGVSgCHROMOSOME_V:g.18609661C>T
Sequence_detailsSMapS_parentSequenceY51A2D
Flanking_sequencesagatcgaggcgttaagccagctgaacggacttataatgaggaaaatcgga
Mapping_targetY51A2D
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (34)
LaboratoryRW
PersonWBPerson1562
WBPerson6900
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WGS_Pasadena_Quinlan
HistoryAcquires_mergeWBVar00224419
StatusLive
AffectsGeneWBGene00305788
WBGene00013082
TranscriptY51A2D.15b.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY51A2D.15b.1:c.3069C>T
HGVSpCE32531:p.Asn1023=
cDNA_position3120
CDS_position3069
Protein_position1023
Exon_number16/21
Codon_changeaaC/aaT
Amino_acid_changeN
Y51A2D.44
Y51A2D.15a.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY51A2D.15a.1:c.3069C>T
HGVSpCE46096:p.Asn1023=
cDNA_position3120
CDS_position3069
Protein_position1023
Exon_number16/22
Codon_changeaaC/aaT
Amino_acid_changeN
Y51A2D.15c.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY51A2D.15c.1:c.2571C>T
HGVSpCE46015:p.Asn857=
cDNA_position2571
CDS_position2571
Protein_position857
Exon_number11/16
Codon_changeaaC/aaT
Amino_acid_changeN
Remark[20081124 db] this Variation was previously named hw93119
MethodWGS_Hawaiian_Waterston