WormBase Tree Display for Variation: WBVar00060103
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WBVar00060103 | Name | Public_name | WBVar00060103 | ||
---|---|---|---|---|---|
Other_name | pas36195 | ||||
haw93119 | |||||
cewivar00048431 | |||||
Y51A2D.15c.1:c.2571C>T | |||||
Y51A2D.15b.1:c.3069C>T | |||||
CE46096:p.Asn1023= | |||||
CE32531:p.Asn1023= | |||||
Y51A2D.15a.1:c.3069C>T | |||||
CE46015:p.Asn857= | |||||
HGVSg | CHROMOSOME_V:g.18609661C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y51A2D | |
Flanking_sequences | agatcgaggcgttaagccagctgaa | cggacttataatgaggaaaatcgga | |||
Mapping_target | Y51A2D | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (34) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson6900 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
WGS_Pasadena_Quinlan | |||||
History | Acquires_merge | WBVar00224419 | |||
Status | Live | ||||
Affects | Gene | WBGene00305788 | |||
WBGene00013082 | |||||
Transcript | Y51A2D.15b.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | Y51A2D.15b.1:c.3069C>T | ||||
HGVSp | CE32531:p.Asn1023= | ||||
cDNA_position | 3120 | ||||
CDS_position | 3069 | ||||
Protein_position | 1023 | ||||
Exon_number | 16/21 | ||||
Codon_change | aaC/aaT | ||||
Amino_acid_change | N | ||||
Y51A2D.44 | |||||
Y51A2D.15a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | Y51A2D.15a.1:c.3069C>T | ||||
HGVSp | CE46096:p.Asn1023= | ||||
cDNA_position | 3120 | ||||
CDS_position | 3069 | ||||
Protein_position | 1023 | ||||
Exon_number | 16/22 | ||||
Codon_change | aaC/aaT | ||||
Amino_acid_change | N | ||||
Y51A2D.15c.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | Y51A2D.15c.1:c.2571C>T | ||||
HGVSp | CE46015:p.Asn857= | ||||
cDNA_position | 2571 | ||||
CDS_position | 2571 | ||||
Protein_position | 857 | ||||
Exon_number | 11/16 | ||||
Codon_change | aaC/aaT | ||||
Amino_acid_change | N | ||||
Remark | [20081124 db] this Variation was previously named hw93119 | ||||
Method | WGS_Hawaiian_Waterston |