WormBase Tree Display for Variation: WBVar00060337
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WBVar00060337 | Name | Public_name | WBVar00060337 | ||
---|---|---|---|---|---|
Other_name | uCE3-898 | ||||
haw43189 | |||||
haw143396 | |||||
cewivar00196571 | |||||
W03A5.1.1:c.*112A>T | |||||
W03A5.3.1:c.*57T>A | |||||
HGVSg | CHROMOSOME_III:g.5413166A>T | ||||
Sequence_details | SMap | S_parent | Sequence | W03A5 | |
Flanking_sequences | atacatgaacaatttattgcatttc | attttaaggcacatcttttacagtc | |||
Mapping_target | W03A5 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Swan | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
SNP_Swan | |||||
History | Acquires_merge | WBVar00563261 | |||
WBVar00269740 | |||||
Status | Live | ||||
Affects | Gene | WBGene00001731 | |||
WBGene00020966 | |||||
Transcript | W03A5.3.1 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | W03A5.3.1:c.*57T>A | ||||
cDNA_position | 564 | ||||
Exon_number | 5/5 | ||||
W03A5.1.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W03A5.1.1:c.*112A>T | ||||
cDNA_position | 2767 | ||||
Exon_number | 12/12 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00005369 | |||||
Remark | [20081124 db] this Variation was previously named hw43189 | ||||
Method | WGS_Hawaiian_Waterston |