WormBase Tree Display for Variation: WBVar00060487
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WBVar00060487 | Name | Public_name | WBVar00060487 | ||
---|---|---|---|---|---|
Other_name | pas4315 | ||||
uCE3-903 | |||||
haw43219 | |||||
haw143415 | |||||
cewivar00106652 | |||||
F48E8.3.2:c.148-16G>A | |||||
F48E8.3.1:c.148-16G>A | |||||
HGVSg | CHROMOSOME_III:g.5461953G>A | ||||
Sequence_details | SMap | S_parent | Sequence | F48E8 | |
Flanking_sequences | aaagtgtccaatatcctcacttctt | aaaaaaatattccaggcatccagcg | |||
Mapping_target | F48E8 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (26) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson6900 | |||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
SNP_Swan | |||||
WGS_Pasadena_Quinlan | |||||
History | Acquires_merge | WBVar00563280 | |||
WBVar00099456 | |||||
WBVar00269745 | |||||
WBVar01263638 | |||||
Status | Live | ||||
Affects | Gene | WBGene00018610 | |||
Transcript | F48E8.3.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F48E8.3.1:c.148-16G>A | ||||
Intron_number | 2/5 | ||||
F48E8.3.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F48E8.3.2:c.148-16G>A | ||||
Intron_number | 2/5 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
WBPaper00005369 | |||||
Remark | [20081124 db] this Variation was previously named hw43219 | ||||
Method | WGS_Hawaiian_Waterston |