WormBase Tree Display for Variation: WBVar00060712
expand all nodes | collapse all nodes | view schema
WBVar00060712 | Name | Public_name | WBVar00060712 | ||
---|---|---|---|---|---|
Other_name | haw43264 | ||||
haw143448 | |||||
cewivar00196655 | |||||
R02F2.1c.1:c.19+1228G>A | |||||
R02F2.1b.1:c.19+1228G>A | |||||
R02F2.1a.1:c.19+1228G>A | |||||
HGVSg | CHROMOSOME_III:g.5503219G>A | ||||
Sequence_details | SMap | S_parent | Sequence | R02F2 | |
Flanking_sequences | attttttgccatctcttgatgtgtt | agagaaaacgtctttgtttcacaca | |||
Mapping_target | R02F2 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00006642 | From_analysis | WGS_De_Bono | |||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00563313 | |||
WBVar01263675 | |||||
Status | Live | ||||
Affects | Gene | WBGene00019831 | |||
Transcript | R02F2.1b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | R02F2.1b.1:c.19+1228G>A | ||||
Intron_number | 2/6 | ||||
R02F2.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | R02F2.1c.1:c.19+1228G>A | ||||
Intron_number | 2/5 | ||||
R02F2.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | R02F2.1a.1:c.19+1228G>A | ||||
Intron_number | 2/6 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw43264 | ||||
Method | WGS_Hawaiian_Waterston |