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WormBase Tree Display for Variation: WBVar00060712

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Name Class

WBVar00060712NamePublic_nameWBVar00060712
Other_namehaw43264
haw143448
cewivar00196655
R02F2.1c.1:c.19+1228G>A
R02F2.1b.1:c.19+1228G>A
R02F2.1a.1:c.19+1228G>A
HGVSgCHROMOSOME_III:g.5503219G>A
Sequence_detailsSMapS_parentSequenceR02F2
Flanking_sequencesattttttgccatctcttgatgtgttagagaaaacgtctttgtttcacaca
Mapping_targetR02F2
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00006642From_analysisWGS_De_Bono
WBStrain00006643From_analysisMillion_mutation_project_reanalysis
WBStrain00006645From_analysisMillion_mutation_project_reanalysis
WBStrain00022930From_analysisMillion_mutation_project_reanalysis
WBStrain00023138From_analysisMillion_mutation_project_reanalysis
WBStrain00027647From_analysisMillion_mutation_project_reanalysis
WBStrain00031113From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00563313
WBVar01263675
StatusLive
AffectsGeneWBGene00019831
TranscriptR02F2.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR02F2.1b.1:c.19+1228G>A
Intron_number2/6
R02F2.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR02F2.1c.1:c.19+1228G>A
Intron_number2/5
R02F2.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR02F2.1a.1:c.19+1228G>A
Intron_number2/6
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw43264
MethodWGS_Hawaiian_Waterston