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WormBase Tree Display for Variation: WBVar00060722

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Name Class

WBVar00060722NamePublic_nameWBVar00060722
Other_nameuCE3-909
haw43266
haw143450
cewivar00196657
R02F2.1a.1:c.20-486T>C
R02F2.1c.1:c.20-486T>C
R02F2.1b.1:c.20-486T>C
HGVSgCHROMOSOME_III:g.5504149T>C
Sequence_detailsSMapS_parentSequenceR02F2
Flanking_sequencesagtttcagcagaattcgaaatacaattgtctaaaaactattttacatgga
Mapping_targetR02F2
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Swan
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WGS_Andersen
WBStrain00005835From_analysisWGS_Andersen
WBStrain00006697From_analysisWGS_Andersen
WBStrain00022928From_analysisWGS_Andersen
WBStrain00022930From_analysisMillion_mutation_project_reanalysis
WGS_Andersen
WBStrain00023150From_analysisWGS_Andersen
WBStrain00023180From_analysisWGS_Andersen
WBStrain00023211From_analysisWGS_Andersen
WBStrain00023279From_analysisWGS_Andersen
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
SNP_Swan
WGS_Andersen
HistoryAcquires_mergeWBVar01445762
WBVar00563315
WBVar00269751
WBVar01445763
StatusLive
AffectsGeneWBGene00019831
TranscriptR02F2.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR02F2.1b.1:c.20-486T>C
Intron_number2/6
R02F2.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR02F2.1c.1:c.20-486T>C
Intron_number2/5
R02F2.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR02F2.1a.1:c.20-486T>C
Intron_number2/6
ReferenceWBPaper00038208
WBPaper00005369
Remark[20081124 db] this Variation was previously named hw43266
MethodWGS_Hawaiian_Waterston