WormBase Tree Display for Variation: WBVar00061327
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| WBVar00061327 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00061327 | |||
| Other_name | haw43387 | ||||
| haw143545 | |||||
| oicr_ce1075 | |||||
| cewivar00196780 | |||||
| B0336.6.2:c.1002A>C | |||||
| CE29545:p.Gly334= | |||||
| B0336.6.1:c.1002A>C | |||||
| HGVSg | CHROMOSOME_III:g.5691121T>G | ||||
| Sequence_details | SMap | S_parent | Sequence | B0336 | |
| Flanking_sequences | ggttcaccgttgattttcgaatagt | ccataattttgttgttgcatttgtt | |||
| Mapping_target | B0336 | ||||
| Type_of_mutation | Substitution | T | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027649 | From_analysis | WGS_Stein | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| WGS_Stein | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00602656 | |||
| WBVar00563410 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00015146 | |||
| Transcript | B0336.6.2 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | B0336.6.2:c.1002A>C | ||||
| HGVSp | CE29545:p.Gly334= | ||||
| cDNA_position | 1036 | ||||
| CDS_position | 1002 | ||||
| Protein_position | 334 | ||||
| Exon_number | 5/7 | ||||
| Codon_change | ggA/ggC | ||||
| Amino_acid_change | G | ||||
| B0336.6.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | B0336.6.1:c.1002A>C | ||||
| HGVSp | CE29545:p.Gly334= | ||||
| cDNA_position | 1026 | ||||
| CDS_position | 1002 | ||||
| Protein_position | 334 | ||||
| Exon_number | 5/7 | ||||
| Codon_change | ggA/ggC | ||||
| Amino_acid_change | G | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw43387 | ||||
| Method | WGS_Hawaiian_Waterston |
