WormBase Tree Display for Variation: WBVar00063191
expand all nodes | collapse all nodes | view schema
WBVar00063191 | Name | Public_name | WBVar00063191 | ||
---|---|---|---|---|---|
Other_name | pas36609 | ||||
haw93736 | |||||
cewivar00113443 | |||||
Y80D3A.2a.1:c.3774+355G>A | |||||
Y80D3A.2b.1:c.129+355G>A | |||||
HGVSg | CHROMOSOME_V:g.18866935C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y80D3A | |
Flanking_sequences | ttttatcgaatttcagtgcctcaaa | actctattttcaggtaaaccgtgtg | |||
Mapping_target | Y80D3A | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | |||
WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson6900 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
WGS_Pasadena_Quinlan | |||||
History | Acquires_merge | WBVar00224833 | |||
Status | Live | ||||
Affects | Gene | WBGene00001258 | |||
Transcript | Y80D3A.2b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y80D3A.2b.1:c.129+355G>A | ||||
Intron_number | 1/3 | ||||
Y80D3A.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y80D3A.2a.1:c.3774+355G>A | ||||
Intron_number | 17/20 | ||||
Remark | [20081124 db] this Variation was previously named hw93736 | ||||
Method | WGS_Hawaiian_Waterston |