WormBase Tree Display for Variation: WBVar00064763
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| WBVar00064763 | Evidence | Paper_evidence | WBPaper00030778 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00064763 | |||
| Other_name | cbs41208 | ||||
| HGVSg | chrII:g.1078357T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | cb25.fpc0022b | |
| Flanking_sequences | aatagctagagaagtgacttctgaacgaatttgtagaaaatgaaatgtattttcagaaaaactaaaaattccccgtttgggaaaaaaccaagttttgatt | aaatttagaaaattatagaaataaattttttggtaaaattttcacactctaaatctaacttttcggtccattctaaaaagcaattgaatcttgcttaata | |||
| Mapping_target | cb25.fpc0022b | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| RFLP | Reference_strain_digest (11) | ||||
| Polymorphic_strain_digest (11) | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis briggsae | |||
| Strain | WBStrain00041077 | ||||
| Laboratory | CP | ||||
| Person | WBPerson3706 | ||||
| WBPerson227 | |||||
| WBPerson225 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00024191 | |||
| Transcript | CBG00864.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | CBG00864.1:c.141-449T>A | ||||
| Intron_number | 2/5 | ||||
| Reference | WBPaper00030778 | ||||
| Remark | Predicted by: ssaha-SNP v2.0 | ||||
| This SNP was observed in 1 sequencing read(s) | |||||
| Method | SNP |
