WormBase Tree Display for Variation: WBVar00065108
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WBVar00065108 | Evidence | Paper_evidence | WBPaper00030778 | |||
---|---|---|---|---|---|---|
WBPaper00055507 | ||||||
Name | Public_name | WBVar00065108 | ||||
Other_name | cbs41277 | |||||
cb41277 | Paper_evidence | WBPaper00055507 | ||||
Sequence_details | SMap | S_parent | Sequence | cb25.fpc0022b | ||
Flanking_sequences | gaagattggtttttgaaccgaaatt | ggggtttttctccaatttttcgatt | ||||
Mapping_target | cb25.fpc0022b | |||||
Type_of_mutation | Substitution | T | G | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
RFLP | Reference_strain_digest | RAATTY | AcsI, ApoI, XapI | 368 145 122 106 68 51 44 35 27 26 8 | ||
CTYRAG | SmlI | 1000 | ||||
AATT | Sse9I, TasI, Tsp509I, TspEI | 350 124 96 73 68 35 31 28 27 26 23 21 20 18 17 16 10 9 8 | ||||
Polymorphic_strain_digest | RAATTY | AcsI, ApoI, XapI | 419 145 122 106 68 44 35 27 26 8 | |||
CTYRAG | SmlI | 529 471 | ||||
AATT | Sse9I, TasI, Tsp509I, TspEI | 350 124 96 73 68 51 35 28 27 26 23 21 18 17 16 10 9 8 | ||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis briggsae | ||||
Strain | WBStrain00041077 | |||||
Laboratory | CP | |||||
Person | WBPerson3706 | |||||
WBPerson227 | ||||||
WBPerson225 | ||||||
Status | Live | |||||
Reference | WBPaper00030778 | |||||
WBPaper00055507 | ||||||
Remark | Predicted by: ssaha-SNP v2.0 | |||||
This SNP was observed in 1 sequencing read(s) | ||||||
Method | SNP |