WormBase Tree Display for Variation: WBVar00065123
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WBVar00065123 | Evidence | Paper_evidence | WBPaper00030778 | |||
---|---|---|---|---|---|---|
WBPaper00055507 | ||||||
Name | Public_name | WBVar00065123 | ||||
Other_name | cbs41280 | |||||
cb41280 | Paper_evidence | WBPaper00055507 | ||||
Sequence_details | SMap | S_parent | Sequence | cb25.fpc0022b | ||
Flanking_sequences | aatgaagctctatttttgttttata | tttctgagcgctttcagaaccatag | ||||
Mapping_target | cb25.fpc0022b | |||||
Type_of_mutation | Substitution | G | A | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
RFLP | Reference_strain_digest | CAC | HindI | 324 252 138 92 48 44 21 18 17 17 11 9 5 2 2 | ||
TTATAA | PsiI | 1000 | ||||
AATT | Sse9I, TasI, Tsp509I, TspEI | 459 125 89 84 71 64 63 28 17 | ||||
Polymorphic_strain_digest | CAC | HindI | 324 236 138 92 48 44 21 18 17 17 16 11 9 5 2 2 | |||
TTATAA | PsiI | 502 498 | ||||
AATT | Sse9I, TasI, Tsp509I, TspEI | 406 89 88 74 71 64 63 53 37 28 17 10 | ||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis briggsae | ||||
Strain | WBStrain00041077 | |||||
Laboratory | CP | |||||
Person | WBPerson3706 | |||||
WBPerson227 | ||||||
WBPerson225 | ||||||
Status | Live | |||||
Reference | WBPaper00030778 | |||||
WBPaper00055507 | ||||||
Remark | Predicted by: ssaha-SNP v2.0 | |||||
This SNP was observed in 1 sequencing read(s) | ||||||
Method | SNP |