WormBase Tree Display for Variation: WBVar00065892

WBVar00065892 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00065892
    Other_name: cbs41434
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc0022b
    Flanking_sequences: gatttctgtgtaagatatcaaaagtttgttaactgataaaatatttgtga aatgtgatcaatattttatcagtttacacatttttgatatcttttatagg
    Mapping_target: cb25.fpc0022b
    Type_of_mutation: Substitution: C A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: GACNNNNNGTC AhdI, AspEI, Eam1105I, EclHKI, NruGI 885 115
        TCNNGA Hpy178III, Hpy188III 375 190 148 134 122 26 5
        TCNGA Hpy188I 318 216 130 114 109 55 46 12
        GTNAC MaeIII 505 398 97
        GTSAC NmuCI, Tsp45I 505 495
        AATT Sse9I, TasI, T, sp509I, TspEI 163 119 114 87 84 68 64 57 57 42 38 36 26 17 14 14
      Polymorphic_strain_digest: GACNNNNNGTC AhdI, AspEI, Eam1105I, EclHKI, NruGI 1000
        TCNNGA Hpy178III, Hpy188III 264 190 148 134 122 111 26 5
        TCNGA Hpy188I 364 216 130 114 109 55 12
        GTNAC MaeIII 903 97
        GTSAC NmuCI, Tsp45I 1000
        AATT Sse9I, TasI, T, sp509I, TspEI 163 133 114 87 84 68 64 57 57 42 38 36 26 17 14
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP