WormBase Tree Display for Variation: WBVar00065902

WBVar00065902 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00065902
    Other_name: cbs41436
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc0022b
    Flanking_sequences: aaaaaagtggtagtccttctcattctttctccccaatagccaccaattca tcataactttctcctgtttccgtttcccctttgtcccccttattcatcca
    Mapping_target: cb25.fpc0022b
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: CYCGRG Ama87I, AvaI, BcoI, BsiHKCI, BsoBI, Eco88I, Nli3877I, NspIII 585 243 172
        GAANNNNTTC Asp700I, MroXI, PdmI, XmnI 366 335 161 67 40 31
        CATG CviAII, FatI, HpyCH4I, Hsp92II, NlaIII 560 196 112 79 44 9
        TGCA CviRI, HpyCH4V 1000
        TTAA MseI, Tru1I, Tru9I 659 314 20 7
      Polymorphic_strain_digest: CYCGRG Ama87I, AvaI, BcoI, BsiHKCI, BsoBI, Eco88I, Nli3877I, NspIII 757 243
        GAANNNNTTC Asp700I, MroXI, PdmI, XmnI 527 335 67 40 31
        CATG CviAII, FatI, HpyCH4I, Hsp92II, NlaIII 545 196 112 79 44 15 9
        TGCA CviRI, HpyCH4V 548 452
        TTAA MseI, Tru1I, Tru9I 328 314 182 149 20 7
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP