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WormBase Tree Display for Variation: WBVar00066081

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Name Class

WBVar00066081EvidencePaper_evidenceWBPaper00030778
WBPaper00055507
NamePublic_nameWBVar00066081
Other_namecbs41472
cb41472Paper_evidenceWBPaper00055507
HGVSgchrII:g.204386A>T
Sequence_detailsSMapS_parentSequencecb25.fpc0022b
Flanking_sequencestgttctaaatgacatatggtttttttgtgatggtgctgatagaagataag
Mapping_targetcb25.fpc0022b
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLPReference_strain_digest (11)
Polymorphic_strain_digest (11)
Natural_variant
OriginSpeciesCaenorhabditis briggsae
StrainWBStrain00041077
LaboratoryCP
PersonWBPerson3706
WBPerson227
WBPerson225
StatusLive
AffectsGeneWBGene00024303
TranscriptCBG01006.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScCBG01006.1:c.347-368T>A
Intron_number4/5
ReferenceWBPaper00030778
WBPaper00055507
RemarkPredicted by: ssaha-SNP v2.0
This SNP was observed in 1 sequencing read(s)
MethodSNP