WormBase Tree Display for Variation: WBVar00066605
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WBVar00066605 | Name | Public_name | WBVar00066605 | |||
---|---|---|---|---|---|---|
Other_name | pas24918 | |||||
cewivar00108502 | ||||||
PAR2.1.1:c.383A>G | ||||||
CE00768:p.Gln128Arg | ||||||
HGVSg | CHROMOSOME_III:g.8769023A>G | |||||
Sequence_details | SMap | S_parent | Sequence | CHROMOSOME_III | ||
Flanking_sequences | attttgaaagcataaaaaaacaaattttgaattcagatcatatcgattcaaaatttatttattatcactatttcagtgtgaataaagtggaactagtcggaggagtcgccttggatccattgtacaagactggaaggaacggaaaaccttacctcatcttcaatatcatcaccaactcgtacttcaagcagcaagacggaactactctcgatcaaactgaacgtcacgccgtttcagttttcggaaagcaagccgaaatcctttcaaaaaccatcaagaaaggatcccgtcttatggttc | ggggagacttcattattctggaggacagaaggacgaacaaggaaaccgtacacaacgcaacacctacatcatcgctcaaactgttcaaccattggctcgagcagctagagagaatccagatcaacattaattttcaaaattttttaaatatttagaatctccgataatagaccattgttgttgtttttgttgacgagttatttacctgattaaacattatctcatatttaaaaaaaaaagttttatttgattgcatacctggttttctaaccatatttattatctgatcgttctttgaaa | ||||
Mapping_target | CHROMOSOME_III | |||||
Type_of_mutation | Substitution | A | G | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | ||||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | ||||
Person | WBPerson6900 | |||||
Analysis | WGS_Pasadena_Quinlan | |||||
Million_mutation_project_reanalysis | ||||||
Status | Live | |||||
Affects | Gene | WBGene00019800 | ||||
Transcript | PAR2.1.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | |||||
SIFT | 0.14 | tolerated | ||||
PolyPhen | 0.694 | possibly_damaging | ||||
HGVSc | PAR2.1.1:c.383A>G | |||||
HGVSp | CE00768:p.Gln128Arg | |||||
cDNA_position | 386 | |||||
CDS_position | 383 | |||||
Protein_position | 128 | |||||
Exon_number | 4/5 | |||||
Codon_change | cAg/cGg | |||||
Amino_acid_change | Q/R | |||||
Method | WGS_Pasadena_Quinlan |