WormBase Tree Display for Variation: WBVar00068187
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WBVar00068187 | Name | Public_name | WBVar00068187 | ||
---|---|---|---|---|---|
Other_name | haw94735 | ||||
cewivar00262878 | |||||
F55C9.5.4:c.-51+167C>A | |||||
F55C9.5.3:c.-66C>A | |||||
F55C9.5.2:c.-222C>A | |||||
F55C9.5.5:c.-66C>A | |||||
F55C9.5.1:c.-66C>A | |||||
HGVSg | CHROMOSOME_V:g.19291201G>T | ||||
Sequence_details | SMap | S_parent | Sequence | F55C9 | |
Flanking_sequences | aaaaacccacaaatcgtttgcgtaa | aattaggcatgtctcttaatagaaa | |||
Mapping_target | F55C9 | ||||
Type_of_mutation | Substitution | G | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00010102 | |||
Transcript | F55C9.5.1 | VEP_consequence | 5_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F55C9.5.1:c.-66C>A | ||||
cDNA_position | 1925 | ||||
Exon_number | 1/5 | ||||
F55C9.5.5 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F55C9.5.5:c.-66C>A | ||||
cDNA_position | 131 | ||||
Exon_number | 2/6 | ||||
F55C9.5.3 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F55C9.5.3:c.-66C>A | ||||
cDNA_position | 218 | ||||
Exon_number | 2/6 | ||||
F55C9.5.4 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F55C9.5.4:c.-51+167C>A | ||||
Intron_number | 1/4 | ||||
F55C9.5.2 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F55C9.5.2:c.-222C>A | ||||
cDNA_position | 291 | ||||
Exon_number | 1/4 | ||||
Remark | [20081124 db] this Variation was previously named hw94735 | ||||
Method | WGS_Hawaiian_Waterston |