WormBase Tree Display for Variation: WBVar00068238
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WBVar00068238 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00068238 | |||
Other_name | haw44769 | ||||
haw144435 | |||||
cewivar00197173 | |||||
F42H10.5a.2:c.-76C>T | |||||
F42H10.5a.1:c.-69+1241C>T | |||||
HGVSg | CHROMOSOME_III:g.8468332C>T | ||||
Sequence_details | SMap | S_parent | Sequence | C30C11 | |
Flanking_sequences | ttcgaaatgaacagtgaagttgtgg | cgaacaagttgagatagcccacttc | |||
Mapping_target | C30C11 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00564300 | |||
Status | Live | ||||
Affects | Gene | WBGene00018369 | |||
Transcript | F42H10.5a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F42H10.5a.1:c.-69+1241C>T | ||||
Intron_number | 1/7 | ||||
F42H10.5a.2 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F42H10.5a.2:c.-76C>T | ||||
cDNA_position | 221 | ||||
Exon_number | 1/8 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw44769 | ||||
Method | WGS_Hawaiian_Waterston |