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WormBase Tree Display for Variation: WBVar00071092

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Name Class

WBVar00071092NamePublic_nameWBVar00071092
Other_namepas39054
haw95452
cewivar00052615
B0399.1f.1:c.474-2498T>G
B0399.1b.1:c.624-2498T>G
B0399.1d.1:c.429-2498T>G
B0399.1a.1:c.765-2498T>G
B0399.1e.1:c.222-2498T>G
HGVSgCHROMOSOME_V:g.19599341T>G
Sequence_detailsSMapS_parentSequenceY43F8C
Flanking_sequencesatttttgatagtaaatgcaattttattgtggcctactcaatttttcagtt
Mapping_targetY43F8C
Type_of_mutationSubstitutionTG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (32)
LaboratoryRW
PersonWBPerson1562
WBPerson6900
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WGS_Pasadena_Quinlan
HistoryAcquires_mergeWBVar00227278
StatusLive
AffectsGeneWBGene00007176
TranscriptB0399.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScB0399.1b.1:c.624-2498T>G
Intron_number6/14
B0399.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScB0399.1d.1:c.429-2498T>G
Intron_number2/9
B0399.1f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScB0399.1f.1:c.474-2498T>G
Intron_number5/12
B0399.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScB0399.1a.1:c.765-2498T>G
Intron_number6/14
B0399.1e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScB0399.1e.1:c.222-2498T>G
Intron_number3/11
Remark[20081124 db] this Variation was previously named hw95452
MethodWGS_Hawaiian_Waterston