WormBase Tree Display for Variation: WBVar00071097
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| WBVar00071097 | Name | Public_name | WBVar00071097 | ||
|---|---|---|---|---|---|
| Other_name | haw95457 | ||||
| cewivar00263817 | |||||
| B0399.1d.1:c.489+73C>T | |||||
| B0399.1f.1:c.534+73C>T | |||||
| B0399.1b.1:c.684+73C>T | |||||
| B0399.1a.1:c.825+73C>T | |||||
| B0399.1c.1:c.114+73C>T | |||||
| B0399.1e.1:c.282+73C>T | |||||
| HGVSg | CHROMOSOME_V:g.19601972C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y43F8C | |
| Flanking_sequences | ccaaaaaccacatattttctcatga | gtctgggctccaaaatgtgtgagaa | |||
| Mapping_target | Y43F8C | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00007176 | |||
| Transcript | B0399.1c.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0399.1c.1:c.114+73C>T | ||||
| Intron_number | 3/10 | ||||
| B0399.1b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0399.1b.1:c.684+73C>T | ||||
| Intron_number | 7/14 | ||||
| B0399.1d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0399.1d.1:c.489+73C>T | ||||
| Intron_number | 3/9 | ||||
| B0399.1f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0399.1f.1:c.534+73C>T | ||||
| Intron_number | 6/12 | ||||
| B0399.1a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0399.1a.1:c.825+73C>T | ||||
| Intron_number | 7/14 | ||||
| B0399.1e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0399.1e.1:c.282+73C>T | ||||
| Intron_number | 4/11 | ||||
| Remark | [20081124 db] this Variation was previously named hw95457 | ||||
| Method | WGS_Hawaiian_Waterston |
