WormBase Tree Display for Variation: WBVar00071802
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WBVar00071802 | Name | Public_name | WBVar00071802 | ||
---|---|---|---|---|---|
Other_name | haw96162 | ||||
cewivar00264435 | |||||
Y116F11B.12c.1:c.1358+1657A>C | |||||
Y116F11B.12b.1:c.1358+1657A>C | |||||
Y116F11B.12a.1:c.1358+1657A>C | |||||
Y116F11B.13.1:c.465-247T>G | |||||
Y116F11B.12a.2:c.1358+1657A>C | |||||
HGVSg | CHROMOSOME_V:g.19885523T>G | ||||
Sequence_details | SMap | S_parent | Sequence | Y116F11B | |
Flanking_sequences | tttcatcttttaaaactagaaaaaa | gaattcctcgtgcaaaataaccctt | |||
Mapping_target | Y116F11B | ||||
Type_of_mutation | Substitution | T | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00001629 | |||
WBGene00013828 | |||||
Transcript | Y116F11B.12b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y116F11B.12b.1:c.1358+1657A>C | ||||
Intron_number | 6/7 | ||||
Y116F11B.12a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y116F11B.12a.2:c.1358+1657A>C | ||||
Intron_number | 7/10 | ||||
Y116F11B.12a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y116F11B.12a.1:c.1358+1657A>C | ||||
Intron_number | 8/11 | ||||
Y116F11B.13.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y116F11B.13.1:c.465-247T>G | ||||
Intron_number | 3/3 | ||||
Y116F11B.12c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y116F11B.12c.1:c.1358+1657A>C | ||||
Intron_number | 6/6 | ||||
Remark | [20081124 db] this Variation was previously named hw96162 | ||||
Method | WGS_Hawaiian_Waterston |