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WormBase Tree Display for Variation: WBVar00071802

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Name Class

WBVar00071802NamePublic_nameWBVar00071802
Other_namehaw96162
cewivar00264435
Y116F11B.12c.1:c.1358+1657A>C
Y116F11B.12b.1:c.1358+1657A>C
Y116F11B.12a.1:c.1358+1657A>C
Y116F11B.13.1:c.465-247T>G
Y116F11B.12a.2:c.1358+1657A>C
HGVSgCHROMOSOME_V:g.19885523T>G
Sequence_detailsSMapS_parentSequenceY116F11B
Flanking_sequencestttcatcttttaaaactagaaaaaagaattcctcgtgcaaaataaccctt
Mapping_targetY116F11B
Type_of_mutationSubstitutionTG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00001629
WBGene00013828
TranscriptY116F11B.12b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY116F11B.12b.1:c.1358+1657A>C
Intron_number6/7
Y116F11B.12a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY116F11B.12a.2:c.1358+1657A>C
Intron_number7/10
Y116F11B.12a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY116F11B.12a.1:c.1358+1657A>C
Intron_number8/11
Y116F11B.13.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY116F11B.13.1:c.465-247T>G
Intron_number3/3
Y116F11B.12c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY116F11B.12c.1:c.1358+1657A>C
Intron_number6/6
Remark[20081124 db] this Variation was previously named hw96162
MethodWGS_Hawaiian_Waterston