WormBase Tree Display for Variation: WBVar00071878
expand all nodes | collapse all nodes | view schema
WBVar00071878 | Name | Public_name | WBVar00071878 | ||
---|---|---|---|---|---|
Other_name | haw96238 | ||||
Y60A3A.13c.1:c.60+164G>A | |||||
Y60A3A.13a.1:c.150+164G>A | |||||
HGVSg | CHROMOSOME_V:g.19907120C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y60A3A | |
Flanking_sequences | tttctttcttttttgtttttttttt | atttttttctctttaaaaaaaattc | |||
Mapping_target | Y60A3A | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Status | Live | ||||
Affects | Gene | WBGene00305848 | |||
WBGene00305850 | |||||
WBGene00305849 | |||||
WBGene00013361 | |||||
Transcript | Y60A3A.39 | ||||
Y60A3A.38 | |||||
Y60A3A.13c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y60A3A.13c.1:c.60+164G>A | ||||
Intron_number | 1/8 | ||||
Y60A3A.37 | |||||
Y60A3A.13a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y60A3A.13a.1:c.150+164G>A | ||||
Intron_number | 2/10 | ||||
Remark | [20081124 db] this Variation was previously named hw96238 | ||||
Method | WGS_Hawaiian_Waterston |