WormBase Tree Display for Variation: WBVar00072744
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| WBVar00072744 | Name | Public_name | WBVar00072744 | ||
|---|---|---|---|---|---|
| Other_name (11) | |||||
| HGVSg | CHROMOSOME_V:g.20244108T>G | ||||
| Sequence_details | SMap | S_parent | Sequence | Y113G7B | |
| Flanking_sequences | ttttcaggctttcttccagaaattt | tgttattttttccaattttttcaaa | |||
| Mapping_target | Y113G7B | ||||
| Type_of_mutation | Substitution | T | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| Million_mutation_project_reanalysis | |||||
| WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
| WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson6900 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Pasadena_Quinlan | |||||
| History | Acquires_merge | WBVar00228954 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00004203 | |||
| Transcript | Y113G7B.23a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y113G7B.23a.1:c.1255+130A>C | ||||
| Intron_number | 5/7 | ||||
| Y113G7B.23f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y113G7B.23f.1:c.445+130A>C | ||||
| Intron_number | 2/3 | ||||
| Y113G7B.23b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y113G7B.23b.1:c.943+130A>C | ||||
| Intron_number | 3/4 | ||||
| Y113G7B.23g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y113G7B.23g.1:c.226+130A>C | ||||
| Intron_number | 1/2 | ||||
| Y113G7B.23c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y113G7B.23c.1:c.1255+130A>C | ||||
| Intron_number | 5/7 | ||||
| Y113G7B.23d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y113G7B.23d.1:c.943+130A>C | ||||
| Intron_number | 3/4 | ||||
| Y113G7B.23h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y113G7B.23h.1:c.226+130A>C | ||||
| Intron_number | 1/2 | ||||
| Y113G7B.23e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y113G7B.23e.1:c.445+130A>C | ||||
| Intron_number | 4/6 | ||||
| Remark | [20081124 db] this Variation was previously named hw97104 | ||||
| Method | WGS_Hawaiian_Waterston |
