WormBase Tree Display for Variation: WBVar00073436
expand all nodes | collapse all nodes | view schema
WBVar00073436 | Name | Public_name | WBVar00073436 | ||
---|---|---|---|---|---|
Other_name | haw97796 | ||||
cewivar00266317 | |||||
F26F2.7a.1:c.553T>C | |||||
CE52915:p.Leu187= | |||||
CE19819:p.Leu185= | |||||
F26F2.7b.1:c.559T>C | |||||
HGVSg | CHROMOSOME_V:g.20582628T>C | ||||
Sequence_details | SMap | S_parent | Sequence | F26F2 | |
Flanking_sequences | aattccactggaattggagcaattt | tgacttatgggcttctacaatgtat | |||
Mapping_target | F26F2 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (20) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01466973 | |||
Status | Live | ||||
Affects | Gene | WBGene00009172 | |||
Transcript | F26F2.7b.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | F26F2.7b.1:c.559T>C | ||||
HGVSp | CE52915:p.Leu187= | ||||
cDNA_position | 610 | ||||
CDS_position | 559 | ||||
Protein_position | 187 | ||||
Exon_number | 7/17 | ||||
Codon_change | Ttg/Ctg | ||||
Amino_acid_change | L | ||||
F26F2.7a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | F26F2.7a.1:c.553T>C | ||||
HGVSp | CE19819:p.Leu185= | ||||
cDNA_position | 598 | ||||
CDS_position | 553 | ||||
Protein_position | 185 | ||||
Exon_number | 7/17 | ||||
Codon_change | Ttg/Ctg | ||||
Amino_acid_change | L | ||||
Remark | [20081124 db] this Variation was previously named hw97796 | ||||
Method | WGS_Hawaiian_Waterston |