WormBase Tree Display for Variation: WBVar00073816
expand all nodes | collapse all nodes | view schema
WBVar00073816 | Name | Public_name | WBVar00073816 | ||
---|---|---|---|---|---|
Other_name | haw98176 | ||||
cewivar00267274 | |||||
W07A8.2c.1:c.2457-58T>A | |||||
W07A8.2b.1:c.2379-58T>A | |||||
W07A8.2a.2:c.2385-58T>A | |||||
W07A8.2e.1:c.2451-58T>A | |||||
W07A8.2b.2:c.2379-58T>A | |||||
W07A8.2a.1:c.2385-58T>A | |||||
HGVSg | CHROMOSOME_V:g.20720090A>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y44A6C | |
Flanking_sequences | atgtgagattataaataaataaata | atatatatatataccgtatttcttc | |||
Mapping_target | Y44A6C | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00012319 | |||
Transcript | W07A8.2e.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | W07A8.2e.1:c.2451-58T>A | ||||
Intron_number | 14/18 | ||||
W07A8.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W07A8.2a.1:c.2385-58T>A | ||||
Intron_number | 15/20 | ||||
W07A8.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W07A8.2b.1:c.2379-58T>A | ||||
Intron_number | 15/20 | ||||
W07A8.2c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W07A8.2c.1:c.2457-58T>A | ||||
Intron_number | 14/18 | ||||
W07A8.2b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W07A8.2b.2:c.2379-58T>A | ||||
Intron_number | 14/19 | ||||
W07A8.2a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W07A8.2a.2:c.2385-58T>A | ||||
Intron_number | 14/19 | ||||
Remark | [20081124 db] this Variation was previously named hw98176 | ||||
Method | WGS_Hawaiian_Waterston |